Running Indirect Cost Calculations
Learn how to calculate and post indirect costs (F&A) for your grants using GrantLink.
Bring this workflow into GrantLink to keep grant accounting tidy.
Running Indirect Cost Calculations
Indirect costs (also called F&A or overhead) are the shared costs of running your organization that support grant-funded programs. GrantLink automates these calculations and posts journal entries to QuickBooks.
What Are Indirect Costs?
Indirect costs are expenses that benefit multiple programs and can't be directly charged to a single grant:
- Rent and utilities
- Administrative salaries
- Accounting and legal fees
- Office supplies
- IT infrastructure
Funders often allow you to recover these costs at an approved rate.
Setting Up Indirect Costs for a Grant
When creating or editing a grant:
- Go to grant Details tab
- Configure indirect cost settings:
| Field | Description | Example |
|---|---|---|
| IDC Rate | Percentage to apply | 15% |
| IDC Base | What costs the rate applies to | MTDC, TDC, Salaries |
| IDC Cap | Maximum indirect recovery | $50,000 or unlimited |
Common IDC Bases
| Base Type | What's Included |
|---|---|
| MTDC (Modified Total Direct Costs) | All direct costs except equipment, subawards over threshold |
| TDC (Total Direct Costs) | All direct costs |
| Salaries & Wages | Personnel costs only |
| Custom | Organization-specific rules |
Running an IDC Calculation
Step 1: Navigate to Indirect Costs
- Go to grant Indirect Costs tab
- Click Calculate
Step 2: Select the Period
Choose the date range for the calculation:
- Monthly (recommended)
- Quarterly
- Custom range
Step 3: Review the Calculation
GrantLink shows a detailed breakdown:
| Category | Amount | In Base? |
|---|---|---|
| Salaries | $50,000 | ✓ Yes |
| Fringe | $15,000 | ✓ Yes |
| Travel | $5,000 | ✓ Yes |
| Equipment | $10,000 | ✗ No (MTDC excludes) |
| Subaward (first $50K) | $25,000 | ✓ Yes |
| Subaward (over $50K) | $15,000 | ✗ No (threshold) |
| Base Total | $95,000 | |
| × Rate (15%) | $14,250 |
Step 4: Approve and Post
- Review the calculation
- Click Approve
- Click Post to QuickBooks
GrantLink creates a journal entry:
| Account | Debit | Credit | Class |
|---|---|---|---|
| Indirect Expense | $14,250 | Grant Class | |
| Indirect Cost Recovery | $14,250 | Grant Class |
Understanding the IDC Journal Entry
The IDC journal entry does two things:
- Attributes overhead to the grant — Shows the grant "cost" including indirect
- Records recovery revenue — Credits your indirect cost recovery account
Important: This JE allocates overhead to the grant. It does not automatically create the "Net Assets Released from Restrictions" entry—that's a separate GAAP requirement handled by your accountant.
Account Mapping
Work with your accountant to map accounts:
| GrantLink Concept | Typical Account Type |
|---|---|
| Indirect Expense | Expense account (program overhead) |
| Indirect Cost Recovery | Revenue (cost-reimbursable) OR Contra-expense (internal) |
Subaward Threshold Tracking
For MTDC calculations, GrantLink automatically tracks subaward thresholds:
- Federal threshold: First $50,000 per subaward is included in base
- Amounts over threshold: Excluded from base calculation
- Per-vendor tracking: Each subrecipient tracked separately
IDC History and Audit Trail
View all IDC calculations for a grant:
- Go to grant Indirect Costs tab
- See the history of all runs
- Click any run to see the full calculation breakdown
Each run records:
- Date calculated
- Period covered
- Base amount
- Rate applied
- Indirect amount
- Posted JE reference
Best Practices
- Calculate monthly — Run IDC at month-end for accurate financials
- Review before posting — Verify the calculation looks correct
- Coordinate with claims — Ensure IDC is included when submitting reimbursement requests
- Avoid double-counting — If claiming IDC on invoices, don't also post IDC JEs that credit revenue
Troubleshooting
IDC Amount Seems Wrong
- Verify the IDC base type is correct
- Check that expenses are allocated to the grant
- Review subaward threshold calculations
Cap Reached
- GrantLink automatically limits IDC to the cap
- Review if budget modification is needed
Put this knowledge to work in GrantLink
Track grants, automate reporting, and stay audit-ready in one place.